个人简历
卢坤 博士，博士后，三级教授，博士生导师，国家重大人才计划入选者、重庆市学术技术带头人、重庆英才·创新创业领军人才、重庆市“巴渝学者”特聘教授、重庆市高校青年骨干教师、首届“全国高校黄大年式教师团队”成员，现任西南大学实验室建设与设备管理处处长、南方山地农业教育部工程研究中心主任、农业科学研究院副院长、重庆市油菜产业技术体系创新团队副首席专家，长期开展油菜基因组设计育种研究。主持国家自然科学基金4项、国家重点研发计划（子）课题4项、其他省部级项目10余项，发表Nat Commun (2)、Plant Biotechnol J (2)、Nucleic Acids Res (2)、Plant Physiol、Plant J和J Exp Bot (3)等第一和(共同)通讯作者论文80余篇，引用次数5800余次，h指数37，参编英文专著3部，获国家发明专利授权16项，主持和参与培育油菜新品种16个，担任4届全国油菜生物学学术研讨会共同执行主席，组织国内外学术会议4次，国际会议口头报告14次；任Front Plant Sci副主编、Hortic Plant J (中科院一区)编委，BMC Plant Biol、Modern Agriculture、Agriculture等期刊编委；任National Science Center Poland国际项目、国家重点研发计划项目、神农中华农业科技奖、国家自然科学基金评审专家；获重庆市自然科学二等奖(第1)、重庆市教学成果一等奖(第6)、2020年中国农学会青年科技奖、第六届重庆市十佳科技青年奖、2023年重庆市“最美科技工作者”等奖励10余项；带领团队多次获央视《新闻联播》《新闻直播间》《中国三农报道》《中国新闻》、人民日报、光明日报、科技日报和学习强国媒体报道。
研究方向
1. 油菜高产基因挖掘与分子机制解析
2. 油菜群体基因组及其适应性进化机制
3. 作物智慧育种与基因组大数据平台开发
学术贡献
1. 揭示油菜的起源和演化规律，挖掘多个重要性状关键基因，揭示其功能和演化机制，为培育突破性重大油菜新品种提供了理论指导，获得Cell和Nat Genet等期刊引用和肯定；
2. 揭示油菜高产和高收获指数的遗传基础，挖掘多个重要产量性状基因，明确其控制激素信号交互，影响细胞周期，提高产量的分子机制，主持和参与培育16个优质高产油菜新品种，获得Nat Genet和Plant Cell等期刊引用和重要国际同行肯定；
3. 整合基因组资源，开发基因组研究和设计育种平台，开发作物育种软件、芯片和平台，获80个国家（地区）科研人员使用，助力油菜基因组设计育种和智慧育种，获得Nature Plants和Plant Cell等期刊引用和多位院士好评。
博士后、研究生招生
1. 博士后：作物学、生物学
2. 博士研究生：作物遗传育种、生物信息学
3. 硕士研究生：作物遗传育种、遗传学、生物信息学、生物化学与分子生物学、农艺与种业
联系方式
E-mail：drlukun at swu.edu.cn
通信地址：重庆市北碚区天生路216号西南大学农业科学研究院；邮编：400716
英文简介
Researchgate：https://www.researchgate.net/profile/Kun-Lu-15
ORCiD: https://orcid.org/0000-0003-1370-8633
Web of Science: https://www.webofscience.com/wos/author/record/C-2597-2008
Google Scholar: https://scholar.google.com/citations?hl=en&user=R964Ky4AAAAJ
Scoups: https://www.scopus.com/authid/detail.uri?authorId=36880988100
学习经历
1998.09-2002.06：西南农业大学农学与生物科技学院，农学学士
2002.09-2004.06：西南农业大学农学与生物科技学院，生态学硕士
2004.09-2008.06：西南大学农学与生物科技学院，农学博士（导师：李加纳）
工作经历
2008.07-2010.05：西南大学，生物学博士后（合作导师：李加纳）
2010.05-2017.06：西南大学农学与生物科技学院，副研究员，硕士生导师
2012.09-2013.09：Department of Horticulture and Landscape Architecture, Purdue University, Postdoctoral fellow (合作导师：Jian-Kang Zhu，美国科学院院士)
2017.07-至今：西南大学农学与生物科技学院，教授，博士生导师
2018.06-至今：南方山地农业教育部工程技术研究中心，主任
2019.06-至今：西南大学农业科学研究院，副院长
2020.06-2022.09：西南大学农学与生物科技学院，党委委员、副院长
2022.09-至今：西南大学实验室建设与设备管理处，处长
荣誉和奖励
2024.12 西南大学第二届何文俊教育发展基金青年教师成才奖一等奖
2024.09 重庆市学术技术带头人
2023.07 重庆市自然科学奖二等奖（甘蓝型油菜基因组进化及品质抗性性状形成的分子机制，第1完成人）
2023.05 2023年重庆市“最美科技工作者”
2022.12 2019-2022年《中国油料作物学报》优秀编委
2022.12 国务院发展研究中心国际技术经济研究所“2022年国内十大科技新闻”
2022.12 中国烟草总公司贵州省公司科技进步奖一等奖
2022.08 入选国家重大人才计划
2021.12 西南大学“十三五”科研工作先进个人
2021.12 西南大学优秀研究生导师
2021.11 2021年川渝科学技术大会优秀论文三等奖
2021.07 重庆市教育系统先进基层党组织负责人
2021.02 2020年中国农学会青年科技奖
2021.01 第六届重庆市十佳科技青年奖
2021.01-2024.12 西南大学“含弘优青岗”
2020.12 首届川渝科学技术大会优秀论文一等奖
2020.11 重庆英才·创新创业领军人才
2020.11 重庆市高校“巴渝学者”特聘教授
2020.11 重庆市新时代高校“双带头人”教师党支部书记工作室负责人
2020.09 西南大学2018-2020年度优秀教师
2019.12 重庆市科协自然科学优秀学术论文奖
2018.12 中国作物学会油料专委会首届“青年创新奖”
2018.01 西南大学2017年优秀本科班主任
2017.12 科睿唯安顶尖同行审阅奖
2013.12 中国烟草总公司贵州省公司科技进步奖二等奖
2011.11 重庆市高等学校青年骨干教师
教学成果
2024.08 第十届中国国际大学生创新大赛重庆赛区银奖指导教师
2023.12 第九届中国国际大学生创新大赛全国金奖、银奖指导教师
2023.09 2023年重庆市本科毕业论文优秀指导教师
2023.09 第九届中国国际大学生创新大赛重庆赛区选拔赛金奖指导教师（2项）
2023.07 西南大学第五届教学成果奖二等奖（第4完成人）、三等奖（第3完成人）
2022.09 第八届中国国际“互联网+”大学生创新创业大赛重庆赛区银奖指导教师
2022.05 重庆市教学成果奖一等奖（第6完成人）
2021.08 第十七届“挑战杯”全国大学生课外学术科技作品竞赛重庆赛区一等奖指导教师
2021.08 第七届中国国际“互联网+”大学生创新创业大赛重庆赛区优秀创新创业导师
2021.08 第七届中国国际“互联网+”大学生创新创业大赛重庆赛区金奖指导教师
2020.12 第十二届“挑战杯”中国大学生创业计划竞赛银奖指导教师
2020.12 西南大学第七届“含弘杯”学术课外学术科技作品竞赛一等奖指导教师
2020.10 第十二届“挑战杯”中国大学生创业计划竞赛重庆赛区金奖指导教师
2020.10 第六届中国国际“互联网+”大学生创新创业大赛重庆赛区银奖指导教师
2017.11 第十五届“挑战杯”全国大学生课外学术科技作品竞赛三等奖指导教师
2017.07 第十五届“挑战杯”全国大学生课外学术科技作品竞赛重庆赛区特等奖指导教师
学术任职
2024.05-至今 全国普通高等学校本科教育教学评估专家
2024.04-至今 国家重点研发计划项目会评专家（常规项目、青年科学家项目）
2024.03-至今 重庆市农学会常务理事、副秘书长
2024.01-至今 《Modern Agriculture》，Editorial Board Associate Member
2023.12-至今 重庆市生物化学与分子生物学会常务理事、农工专委会主任
2023.12-至今 《农业生物技术学报》，编委
2023.09-至今 《Agriculture》，Editorial Board Member
2023.05-至今 重庆市油菜产业技术体系创新团队，副首席专家
2023.01-至今 一区TOP期刊《Horticultural Plant Journal》，编委
2022.10-至今 National Science Center Poland，Reviewer
2022.07-至今 中国国际大学生创新创业大赛，评审专家
2022.02-2025.02 重庆市江津区乡村振兴智库，专家
2021.11-至今 《BMC Plant Biology》，Editorial Board Member
2021.07-至今 《Frontiers in Plant Science》，Associate Editor
2021.03-至今 神农中华农业科技奖，评审专家
2019.08-至今 北京、河北、四川、贵州、广西科技奖励和项目评审专家
2019.07-至今 Oil Crop Science，Editorial Board Member
2019.07-至今 《中国油料作物学报》，编委
2019.07-至今 全球油菜创新理事会（GCIRC），理事
2016-至今 国家自然科学基金，通讯评审专家
2014-至今 Nature Communications、The Plant Cell、Genome Biology等期刊审稿专家
主持科研项目
1. 国家自然科学基金面上项目：BnaA1.CIPK6磷酸化修饰AUF1负调控油菜种子和角果发育的分子机制，2023.01-2026.12 55万 （32272111）
2. 国家自然科学基金面上项目：甘蓝型油菜SPL基因介导ROS和SA途径提高菌核病抗性的分子机制， 2019.01-2022.12 60万 (31871653)
3. 国家自然科学基金面上项目：甘蓝型油菜生长素极性运输异常导致茎秆弯曲的分子机制， 2016.01-2019.12 69.6万 (31571701)
4. 国家自然科学基金青年基金项目：甘蓝型油菜组织特异型启动子的分离与鉴定， 2012.01-2014.12 23万 (31101175)
5. 国家重点研发计划课题：长江上游及北方油菜高产优质适宜机械化新品种培育——油菜优异育种新材料的创制， 2018.06-2021.06 456万 (2018YFD0100501)
6. 农业生物育种国家科技重大专项：营养高效利用油菜新品种设计与培育，2023.12-2025.12 168万 （2023ZD0404201）
7. 国家重点研发计划子课题：油菜和花生重要基因的育种演变及其与环境的互作， 2022.12-2027.11 56万 （2022YFD1200404）
8. 国家重点研发计划子课题：油菜、蔬菜重要性状的功能基因组与调控网络——油菜高收获指数和高产形成分子机制 2016.07-2021.06 60万 (2016YFD0101007)
9. 重庆市自然科学基金创新发展联合基金项目：SBT1调控茎尖发育影响油菜角果数形成的分子机制，2024.07-2027.12 50万 (CSTB2024NSCQ-LZX0012)
10. 重庆英才计划项目：甘蓝型油菜高产基因的挖掘、机制解析和育种应用，2021.07-2024.12 40万 (cstc2021ycjh-bgzxm0033)
11. 重庆市自然科学基金基础研究与前沿探索项目：基于转录组与全基因组关联分析发掘甘蓝型油菜结角性状相关基因， 2018.07-2021.06 (cstc2018jcyjA1219)
12. 重庆市现代农业产业技术体系项目：种质创制技术与方法功能研究室，2023.07-2026.06 36万 (COMAITS202304)
13. 西南大学自然科学领域青年培育团队项目：作物种质创制与利用团队，2023.06-2026.06 100万 （SWU-XJPY202306）
代表性论文（*:通讯作者；#共同第一作者）
1. Kun Lu#, Lijuan Wei#, Xiaolong Li#, Yuntong Wang, Jian Wu, Miao Liu, Chao Zhang, Zhiyou Chen, Zhongchun Xiao, Hongju Jian, Feng Cheng, Kai Zhang, Hai Du, Xinchao Cheng, Cunming Qu, Wei Qian, Liezhao Liu, Rui Wang, Qingyuan Zou, Jiamin Ying, Xingfu Xu, Jiaqing Mei, Ying Liang, You-Rong Chai, Zhanglin Tang, Huafang Wan, Yu Ni, Yajun He, Na Lin, Yonghai Fan, Wei Sun, Nan-Nan Li, Gang Zhou, Hongkun Zheng, Xiaowu Wang*, Andrew H Paterson*, Jiana Li* (2019) Whole-genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement. Nature Communications. 10: 1154. IF2019=12.124. (一区TOP期刊). 11 Mar 2019, https://doi.org/10.1038/s41467-019-09134-9
2. Cunmin Qu#, Meichen Zhu#, Ran Hu#, Yongchao Niu#, Si Chen#, Huiyan Zhao#, Chengxiang Li, Zhen Wang, Nengwen Yin, Fujun Sun, Zhiyou Chen, Shulin Shen, xia Shang, Yan Zhou, Xingying Yan, Lijuan Wei, Liezhao Liu, Bin Yi, Jinmin Lian, Jiang Li, Zhanglin Tang, Ying Liang, Xinfu Xu, Rui Wang, Jiaming Yin, Huafang Wan, Hai Du, Wei Qian, Yourong Chai, Qingyuan Zhou, Yajun He, Silin Zhong, Xiao Qiu, Hao Yu, Hon-Ming Lam, Kun Lu*, Fuyou Fu*, Jiana Li* (2023) Comparative genomic analyses reveal the genetic basis of the yellow-seed trait in Brassica napus. Nature Communications. 14: 5194. IF2022=17.69. (一区TOP期刊). 25 Aug 2023 (入选Editors’ Highlights) https://doi.org/10.1038/s41467-023-40838-1
3. Xiaodong Li#, Boyu Meng#, Zhi Zhang, Lijuan Wei, Wei Chang, Yuhong Wang, Kai Zhang*, Tian Li*, Kun Lu* (2025) qPrimerDB 2.0: an updated comprehensive gene-specific qPCR primer database for 1172 organisms. Nucleic Acids Research. 53, D205–D210. IF2023= 16.97. 6 Jan 2025. https://doi.org/10.1093/nar/gkae684
4. Hui Wang#,*, Xiaodong Li#, Boyu Meng, Yonghai Fan, Shahid Ullah Khan, Mingchao Qian, Minghao Zhang, Haikun Yang, Kun Lu* (2024) Exploring silique number in Brassica napus L.: genetic and molecular advances for improving yield. Plant Biotechnology Journal. 22: 1897–1912. IF2024=10.1. (一区TOP期刊) 22 Jul 2024 https://doi.org/10.1111/pbi.14309
5. Liyuan Zhang#, Bo Yang#, Xiaodong Li, Si Chen, Chao Zhang, Sirou Xiang, Tingting Sun, Ziyan Yang, Xizeng Kong, Cunmin Qu*, Kun Lu*, Jiana Li* (2024) Integrating GWAS, RNA-Seq and functional analysis revealed that BnaA02.SE mediates silique elongation by affecting cell proliferation and expansion in Brassica napus. Plant Biotechnology Journal. 22: 2907–2920 IF2023=13.26. (一区TOP期刊) Jun 20 2024. https://doi.org/10.1111/pbi.14413
6. Kun Lu*,#, Tian Li, Jian He, Wei Chang, Rui Zhang, Miao Liu, Mengna Yu, Yonghai Fan, Jinqi Ma, Wei Sun, Cunmin Qu, Liezhao Liu, Nannan Li, Ying Liang, Rui Wang, Wei Qian, Zhanglin Tang, Xinfu Xu, Bo Lei, Kai Zhang*, Jiana Li* (2018) qPrimerDB: A thermodynamics-based gene-specific qPCR primer database for 147 organisms. Nucleic Acids Research 46: D1229–D1236. IF2018= 11.147. (一区TOP期刊) 4 Jan 2018, https://doi.org/10.1093/nar/gkx725
7. Lijuan Wei#, Hai Du#, Xiaodong Li, Yonghai Fan, Minchao Qian, Yali Li, Huiyi Wang, Cunmin Qu, Wei Qian, Xinfu Xu, Zhanglin Tang, Kai Zhang, Jiana Li*, Kun Lu* (2022) Spatio-temporal transcriptome profiling and subgenome analysis in the Brassica napus. The Plant Journal. 111: 1123–1138. IF2021=7.091. (一区TOP期刊) 28 Jun 2022, https://doi.org/10.1111/tpj.15881
8. Wei Chang, Huina Zhao, Hongqiao Chen, Guixiang Jiao, Jing Yu, Bing Wang, Haiqian Xia, Boyu Meng, Xiaodong Li, Mengna Yu, Shengting Li, Mingchao Qian, Yonghai Fan, Kai Zhang, Bo Lei*, Kun Lu* (2024) The transcription factor NtNAC56 regulates jasmonic acid-induced leaf senescence in tobacco. Plant Physiology. 195: 1925–1940 IF2023=7.4. (一区TOP期刊) 2 March 2024, https://doi.org/10.1093/plphys/kiae116
9. Mengna Yu, Yonghai Fan, Xiaodong Li, Xingyu Chen, Shijie Yu, Siyu Wei, Shengting Li, Wei Chang, Cunmin Qu, Jiana Li, Kun Lu* (2023) LESION MIMIC MUTANT 1 confers basal resistance to Sclerotinia sclerotiorum in rapeseed via a salicylic acid-dependent pathway Journal of Experimental Botany. 74(18): 5620–5634 IF2022=6.9. (一区TOP期刊) 29 Sep 2023, https://doi.org/10.1093/jxb/erad295
10. Xiaodong Li, Xumei Liu, Yonghai Fan, Yuling Chen, Shengting Li, Mengna Yu, Mingchao Qian, Hongqiao Chen, Xinchun Li, Bei Liu, Xinfu Xu, Cunmin Qu, Jiana Li, Kun Lu* (2023) Development of a targeted capture SNP array for genetic analysis and genomic breeding in rapeseed. The Crop Journal. 11(2): 499–510 IF2022=6.6. (一区TOP期刊)
其他第一和通讯作者论文（*:通讯作者；#共同第一作者）
1. Yonghai Fan#, Yuling Chen#, Xiaodong Li#, Hongqiao Chen, Mengna Yu, Likai Miao, Siyu Wei, Shengting Li, Mingchao Qian, Wei Chang, Umer Mahmood, Shahid Ullah Khan, Lijuan Wei, Cunmin Qu, Jiana Li, Kun Lu* (2024) The brassinosteroid-signaling gene BnaC04.BIL1 contributes to plant architecture in Brassica napus Industrial Crops and Products. 210: 118066 IF2023=5.9. (一区TOP期刊) 1 April 2024, https://doi.org/10.1016/j.indcrop.2024.118066
2. Shahid Ullah Khan#, Ahmad Ali#, Sumbul Saeed, Yonghai Fan, Ali Shehazd, Hameed Gul, Shah Fahad*, Kun Lu* (2024) Ovule number as a rising star for regulating seed yield: Hope or hype. Journal of Integrative Agriculture. 23(11): 3623–3640 IF2023=4.8. (一区TOP期刊), https://doi.org/10.1016/j.jia.2024.02.013
3. Hui Wang, Xiaodong Li, Boyu Meng, Wei Chang, Minghao Zhang, Likai Miao, Siyu Wei, Haikun Yang, Shengting Li, Yonghai Fan, Mingchao Qian, Yuling Chen, Shahid Ullah Khan, Lijuan Wei, Cunmin Qu, Jiana Li, Jiaming Song*, Kun Lu* (2024) Deciphering the Arf (ADP-ribosylation factor) gene family in Brassica napus L.: Genome-wide insights into duplication, expression, and rapeseed yield enhancement. International Journal of Biological Macromolecules. 282(2024): 137257 IF2023=7.7. (一区TOP期刊), https://doi.org/10.1016/j.ijbiomac.2024.137257
4. Shahid Ullah Khan, Minchao Qian, Shengting Li, Yonghai Fan, Hui Wang, Wei Chang, Osama Alam, Sumbul Saeed, Kun Lu (2024) Unveiling CRISPR/Cas in Rapeseed: Triumphs, Trials, and Tomorrow. New Crops. (2) 100045, https://doi.org/10.1016/j.ncrops.2024.100045
5. Liyuan Zhang, Chao Zhang, Bo Yang, Si Chen, Ziyan Yang, Lin Kang, Jinxiong Xu, Tingting Sun, Xizeng Kong, Cunmin Qu, Kun Lu*, Jiana Li* (2024) Comprehensive high-throughput sequencing, evolutionary and functional analyses reveal the conservation and diversification of miR166s in regulating pleiotropic traits between rapeseed and Arabidopsis Industrial Crops and Products. 218: 118817 IF2023=5.9. (一区TOP期刊) 15 October 2024, https://doi.org/10.1016/j.indcrop.2024.118817
6. Ali Shahzad, Yonghai Fan, Mingchao Qian, Shahid Ullah Khan, Umer Mahmood, Lijuan Wei, Cunmin Qu, Kun Lu* (2024) Genome-wide characterization Related to ABI3/VP1 transcription factors among U’s triangle Brassica species reveals a negative role for BnaA06.RAV3L in seed size. Plant Physiology and Biochemistry 213: 108854 IF2023=6.5 https://doi.org/10.1016/j.plaphy.2024.108854
7. Shahid Ullah Khan*, Muhammad Sirab Khan, Hui Wang, Mingchao Qian, Talha Javed, Shah Fahad*, Kun Lu* (2024) Harnessing Nanobiotechnology for Drought Stress: Transforming Agriculture's Future; What, Why and How? Environmental Science: Nano. IF2023=7.3 11: 2861-2884 https://doi.org/10.1039/D4EN00112E
8. Shahid Ullah Khan, Muneeb Ullah, Sumbul Saeed, Ebraheem Abdu Musad Saleh, Asmaa F. Kassem, Fawad Mueen Arbi, Abdul Wahab, Maha Rehman, Khalil ur Rehman*, Dilfaraz Khan, Umber Zaman, Khalid Ali Khan, Muhammad Amir Khan, Kun Lu* (2024) Nanotherapeutic approaches for transdermal drug delivery systems and their biomedical applications. European Polymer Journal. 207: 112819 IF2023=6 https://doi.org/10.1016/j.eurpolymj.2024.112819
9. Weihong Xu#, He Huang#, Xiaodong Li#, Mei Yang#, Sunlin Chi, Yu Pan, Nannan Li, Andrew H. Paterson*, Yourong Chai*, Kun Lu* (2023) CaHMA1 promotes Cd transport and accumulation in pepper fruit. Journal of Hazardous Materials. 460: 130280. IF2022=13.6. (一区TOP期刊) 4 Sep 2023, https://doi.org/10.1016/j.jhazmat.2023.132480
10. Umer Mahmood, Xiaodong Li, Mingchao Qian, Yonghai Fan, Mengna Yu, Shengting Li, Ali Shahzad, Cunmin Qu, Jiana Li, Liezhao Liu, Kun Lu* (2023) Comparative transcriptome and co-expression network analysis revealed the genes associated with senescence and polygalacturonase activity involved in pod shattering of rapeseed. Biotechnology for Biofuels and Bioproducts. 16: 20 IF2022=7.67. https://doi.org/10.1186/s13068-023-02275-6
11. Wei Chang, Hongqiao Chen, Guixiang Jiao, Yi Dou, Lin Liu, Cunmin Qu, Jiana Li, and Kun Lu* (2022) Biomolecular strategies for vascular bundle development to improve crop yield. Biomolecules. 12(12), 1772 IF2022= 6.064. 28 Nov 2022, https://doi.org/10.3390/biom12121772
12. Mengna Yu#, Rui Zhang#, Yajun Liu, Yuan Gu, Guoxia Shang, Yonghai Fan, Miao Liu, Shengting Li, Yuqiao Tang, Chuanfang Wan, Xuli Wu, Cunmin Qu, Jiana Li, Kun Lu* (2022) Quantitative trait locus mapping and transcriptome analysis reveal candidate genes for a stem bending mutant in rapeseed (Brassica napus). Industrial Crops and Products. 177: 114466 IF2022= 6.449. (一区TOP期刊) 1 Mar 2022, https://doi.org/10.1016/j.indcrop.2021.114456
13. Umer Mahmood, Xiaodong Li, Yonghai Fan, Wei Chang, Yue Niu, Jiana Li, Cunmin Qu*, Kun Lu* (2022) Multi-omics revolution to promote plant breeding efficiency. Frontiers in Plant Science 13: 855486. IF2022= 6.627. 08 December 2022, https://doi.org/10.3389/fpls.2022.1062952
14. Chao Zhang#, Wei Chang#, Xiaodong Li, Bo Yang, Liyuan Zhang, Zhongchun Xiao, Jiana Li*, Kun Lu* (2022) Transcriptome and small RNA sequencing reveal the mechanisms regulating harvest index in Brassica napus. Frontiers in Plant Science 13:855486. IF2022= 6.627. 4 Apr 2022, https://doi.org/10.3389/fpls.2022.855486
15. Bo Lei#, Wei Chang#, Huina Zhao, Kai Zhang, Jing Yu, Shizhou Yu, Kai Cai, Jie Zhang, Kun Lu* (2022) Nitrogen application and differences in leaf number retained after topping affect the tobacco (Nicotiana tabacum) transcriptome and metabolome. BMC Plant Biology 22: 38 IF2022= 5.260. 19 Jan 2022, https://doi.org/10.1186/s12870-022-03426-x
16. Mengqi Li, Yuqiao Tang, Mengna Yu, Yonghai Fan, Shahid Ullah Khan*, Wei Chang, Xiaodong Li, Siyu Wei, Lijuan Wei, Cunmin Qu, Jiana Li, Kun Lu* (2022) Systematic characterization of Brassica napus HIR gene family reveals a positive role of BnHIR2.7 in Sclerotinia sclerotiorum resistance. Horticulturae 8(10), 874 IF2022= 2.923. 23 Sep 2022, https://doi.org/10.3390/horticulturae8100874
17. Farah Kamal#, Shulin Shen#, Ran Hu, Qianwei Zhang, Nengwen Yin, Yifang Ma, Yuxiang Jiang, Xinfu Xu, Jiana Li, Kun Lu*, Cunmin Qu* (2022) Metabolite characteristics analysis of siliques and effects of lights on the accumulation of glucosinolates in siliques of rapeseed. Frontiers in Plant Science 13: 817419. IF2022= 6.627. 16 Feb 2022, https://doi.org/10.3389/fpls.2022.817419
18. Bangyang Sun#, Yonghai Fan#, Huichun Duan, Xumei Liu, Yuling Chen, Guoxia Shang, Yingnan Liu, Hui Yang, Cunmin Qu, Jiana Li, Kun Lu* (2022) Genome-wide characterization of Brassica napus INDETERMINATE DOMAIN genes reveals a negative role for BnA08.IDD7 in plant development. Industrial Crops and Products. 175: 114263. IF2022= 6.449. (一区TOP期刊) 1 Jan 2022, https://doi.org/10.1016/j.indcrop.2021.114263
19. Mingchao Qian#, Yonghai Fan#, Yanhua Li, Miao Liu, Wei Sun, Huichun Duan, Mengna Yu, Wei Chang, Yue Niu, Xiaodong Li, Ying Liang, Cunmin Qu, Jiana Li, Kun Lu* (2021) Genome-wide association study and transcriptome comparison reveal novel QTL and candidate genes that control petal size in rapeseed. Journal of Experimental Botany. 72(10): 3597–3610 IF2021=7.298. (一区TOP期刊) 4 May 2021, https://doi.org/10.1093/jxb/erab105
20. Miao Liu, Wei Chang, Mengna Yu, Yonghai Fan, Guoxia Shang, Yuanfang Xu, Yue Niu, Xumei Liu, Hong Zhu, Lishi Dai, Zhanglin Tang, Kai Zhang, Liezhao Liu, Cunmin Qu, Jiana Li, Kun Lu* (2021) Overexpression of DEFECTIVE IN ANTHER DEHISCENCE 1 increases rapeseed silique length through crosstalk between JA and auxin signaling. Industrial Crops and Products. 168(2021): 113576. IF2021= 6.449. (一区TOP期刊) 15 Sep 2021, https://doi.org/10.1016/j.indcrop.2021.113576
21. Umer Mahmood#, Yonghai Fan#, Siyu Wei#, Yue Niu, Yanhua Li, Hualei Huang, Yuling Chen, Zhanglin Tang, Liezhao Liu, Cunmin Qu, Kai Zhang, Jiana Li, Kun Lu* (2021) Comprehensive analysis of polygalacturonase genes offers new insights into their origin and functional evolution in land plants. Genomics. 113(2): 1096–1108. IF2021= 5.736. 1 Jan 2021, https://doi.org/10.1016/j.ygeno.2020.11.006
22. Ali Shahzad#, Minchao Qian#, Bangyang Sun, Umer Mahmood, Shengting Li, Yonghai Fan, Wei Chang, Lishi Dai, Hong Zhu, Jiana Li, Cunmin Qu*, Kun Lu* (2021) Genome-wide association study identifies novel loci and candidate genes for drought stress tolerance in rapeseed. Oil Crop Science. 6: 12–22. 1 March 2021, https://doi.org/10.1016/j.ocsci.2021.01.002
23. Yue Niu, Limin Wu, Yanhua Li, Hualei Huang, Mingchao Qian, Wei Sun, Hong Zhu, Yuanfang Xu, Yonghai Fan, Umer Mahmood, Benbo Xu, Kai Zhang, Cunmin Qu, Jiana Li, Kun Lu* (2020) Deciphering the transcriptional regulatory networks that control size, color, and oil content in Brassica rapa seeds. Biotechnology for Biofuels 13: 87. IF2021= 7.670. (一区TOP期刊) 18 May 2020, https://doi.org/10.1186/s13068-020-01728-6
24. Haoyu Chao#, Tian Li#, Chaoyu Luo#, Hualei Huang, Yingfei Ruan, Xiaodong Li, Yue Niu, Yonghai Fan, Wei Sun, Kai Zhang, Jiana Li, Cunmin Qu, Kun Lu* (2020) BrassicaEDB: A gene expression database for Brassica crops. International Journal of Molecular Sciences 21: 5831. IF2021= 6.208. 13 Aug 2020, https://doi.org/10.3390/ijms21165831
25. Cunmin Qu#, Nengwen Yin#, Si Chen, Shuxian Wang, Xingyu Chen, Huiyan Zhao, Shulin Shen, Fuyou Fu, Baojin Zhou, Xinfu Xu, Liezhao Liu, Kun Lu*, Jiana Li* (2020) Comparative analysis of the metabolic profiles of yellow- vs. black-seeded rapeseed using UPLC−HESI-MS/MS and transcriptome analysis. Journal of Agricultural and Food Chemistry. 68: 3033–3049. IF2020= 5.279. (一区TOP期刊) 11 Mar 2020, https://doi.org/10.1021/acs.jafc.9b07173
26. Wei Chang#, Huina Zhao#, Shizhou Yu, Jing Yu, Kai Cai, Wei Sun, Xumei Liu, Xiaodong Li, Mengna Yu, Shahzad Ali, Kai Zhang, Cunmin Qu, Bo Lei*, Kun Lu* (2020) Comparative transcriptome and metabolomic profiling reveal the complex mechanisms underlying the developmental dynamics of tobacco leaves. Genomics. 112(6): 4009–4022. IF2020= 5.736. 1 Nov 2021, https://doi.org/10.1016/j.ygeno.2020.07.005
27. Shulin Shen#, Fujun Sun#, Meichen Zhu#, Si Chen, Mingwei Guan, Rui Chen, Fang Tang, Nengwen Yin, Xinfu Xu, Zhanglin Tang, Jiana Li, Kun Lu*, Cunmin Qu* (2020). Genome-wide identification AINTEGUMENTA-like (AIL) genes in Brassica species and expression patterns during reproductive development in Brassica napus L. PLoS One, 15(6): e0234411. IF2021= 3.752. 8 Jun 2020, https://doi.org/10.1371/journal.pone.0234411
28. Yuanyuan Wan#, Zhen Wang#, Jichun Xia, Shulin Shen, Mingwei Guan, Meichen Zhu, Cailin Qiao, Fujun Sun, Ying Liang, Jiana Li, Kun Lu*, Cunmin Qu* (2020) Genome-wide analysis of phosphorus transporter genes in Brassica and their roles in heavy metal stress tolerance. International Journal of Molecular Sciences 21(6): 2209. IF2021= 6.208. 23 Mar 2020, https://doi.org/10.3390/ijms21062209
29. Zhiyou Chen#, Qiang Huo#, Hong Yang#, Hongju Jian, Cunmin Qu, Kun Lu*, Jiana Li* (2019) Joint RNA-Seq and miRNA profiling analyses to reveal molecular mechanisms in regulating thickness of pod canopy in Brassica napus. Genes. 10(8): E591. IF2021= 4.414. 5 Aug 2019, https://doi.org/10.3390/genes10080591
30. Miao Liu#, Wei Chang#, Yonghai Fan, Wei Sun, Cunmin Qu, Kai Zhang, Liezhao Liu, Xingfu Xu, Zhanglin Tang, Jiana Li, Kun Lu* (2018) Genome-wide identification and characterization of NODULE-INCEPTION-Like Protein (NLP) family genes in Brassica napus. International Journal of Molecular Sciences 19: 2270. IF2021= 6.208. 2 Aug 2018, https://doi.org/10.3390/ijms19082270
31. Haojie Li#, Yonghai Fan#, Jingyin Yu, Liang Chai, Jingfang Zhang, Jun Jiang, Cheng Cui, Benchuan Zheng, Liangcai Jiang*, Kun Lu* (2018) Genome-wide identification of flowering-time genes in Brassica species and reveals a correlation between selective pressure and expression patterns of vernalization-pathway genes in Brassica napus. International Journal of Molecular Sciences 19: 3632. IF2021= 6.208. 18 Nov 2018, https://doi.org/10.3390/ijms19113632
32. Yonghai Fan#, Mengna Yu#, Miao Liu, Rui Zhang, Wei Sun, Mingchao Qian, Huichun Duan, Wei Chang, Jinqi Ma, Cunmin Qu, Kai Zhang*, Bo Lei*, Kun Lu* (2017) Genome-wide identification, evolutionary and expression analyses of the GALACTINOL SYNTHASE gene family in rapeseed and tobacco. International Journal of Molecular Sciences 18: 2768. IF2021= 6.208. 20 Dec 2017, https://doi.org/10.3390/ijms18122768
33. Kai Zhang, Zhengdan Wu, Daobin Tang, Kai Luo, Huixiang Lu, Yingying Liu, Jie Dong, Xin Wang, Changwen Lv*, Jichun Wang*, Kun Lu* (2017) Comparative transcriptome analysis reveals critical function of sucrose metabolism related-enzymes in starch accumulation in the storage root of sweet potato. Frontiers in Plant Science 8:914. IF2018= 4.106.
34. Kun Lu#,*, Liu Peng#, Chao Zhang, Junhua Lu, Bo Yang, Zhongchun Xiao, Ying Liang, Xingfu Xu, Cunmin Qu, Kai Zhang, Liezhao Liu, Qinlong Zhu, Minglian Fu, Xiaoyan Yuan, Jiana Li* (2017) Genome-wide association and transcriptome analyses reveal candidate genes underlying yield-determining traits in Brassica napus. Frontiers in Plant Science 8: 206. IF2018= 4.106.
35. Kun Lu#, Zhongchun Xiao#, Hongju Jian#, Liu Peng, Cunmin Qu, Minglian Fu, Bin He, Linmei Tie, Ying Liang, Xingfu Xu, Jiana Li* (2016) A combination of genome-wide association and transcriptome analysis reveals candidate genes controlling harvest index-related traits in Brassica napus. Scientific Reports 6: 36452. IF2018= 4.011.
36. Cunmin Qu#, Huiyan Zhao#, Fuyou Fu#, Kai Zhang, Jianglian Yuan, Liezhao Liu, Rui Wang, Xinfu Xu, Kun Lu*, Jia-Na Li* (2016) Molecular mapping and QTL for expression profiles of flavonoid genes in Brassica napus. Frontiers in Plant Science 7:1691. IF2018= 4.106.
37. Cunmin Qu#, Huiyan Zhao#, Fuyou Fu#, Zhen Wang, Kai Zhang, Yan Zhou, Xin Wang, Rui Wang, Xinfu Xu, Zhanglin Tang, Kun Lu*, Jia-Na Li* (2016) Genome-wide survey of flavonoid biosynthesis genes and gene expression analysis between black and yellow-seeded Brassica napus. Frontiers in Plant Science. 7:1755. IF2018= 4.106.
38. Kun Lu#,*, Wenjin Guo#, Junxing Lu#, Hao Yu, Cunmin Qu, Zhanglin Tang, Jiana Li, Yourong Chai, Ying Liang* (2015) Genome-wide survey and expression profile analysis of the mitogen-activated protein kinase (MAPK) gene family in Brassica rapa. PLoS ONE 10: e0132051. IF2018= 2.776.
39. Cunmin Qu#, Fuyou Fu#, Miao Liu#, Huiyan Zhao, Chuan Liu, Jiana Li, Zhanglin Tang, Xinfu Xu, Xiao Qiu, Rui Wang*, Kun Lu* (2015) Comparative transcriptome analysis of recessive male sterility (RGMS) in sterile and fertile Brassica napus Lines. PLoS ONE, 10: e0144118. IF2018= 2.776.
40. Bo Lei#, Kun Lu#,*, Fuzhang Ding, Kai Zhang, Yi Chen, Huina Zhao, Lin Zhang, Zhu Ren, Cunmin Qu, Wenjing Guo, Jing Wang, Wenjie Pan* (2014) RNA sequencing analysis reveals transcriptomic variations in tobacco (Nicotiana tabacum) leaves affected by climate, soil, and tillage factors. International Journal of Molecular Sciences 15(4): 6137−6160. IF2021= 6.208.
41. Bo Lei, Xue-Hua Zhao, Kai Zhang, Jie Zhang, Wei Ren, Zhu Ren, Yi Chen, Hui-Na Zhao, Wen-Jie Pan, Wei Chen, Hong-Xun Li, Wen-Ya Deng, Fu-Zhang Ding*, Kun Lu* (2013) Comparative transcriptome analysis of tobacco (Nicotiana tabacum) leaves to identify aroma compound-related genes expressed in different cultivated regions. Molecular Biology Reports 40: 345−357. IF2018= 2.107.
42. Cunmin Qu#, Fuyou Fu#, Kun Lu#, Kai Zhang, Rui Wang, Xinfu Xu, Min Wang, Junxing Lu, Huafang Wan, Tang Zhanglin, Jiana Li (2013) Differential accumulation of phenolic compounds and expression of related genes in black- and yellow-seeded Brassica napus. Journal of Experimental Botany 64(10): 2885−2898. IF2017=5.360. (一区TOP期刊)
43. Kun Lu, You-Rong Chai*, Kai Zhang, Rui Wang, Li Chen, Bo Lei, Jun Lu, Xin-Fu Xu, Jia-Na Li (2008). Cloning and characterization of phosphorus starvation inducible Brassica napus PURPLE ACID PHOSPHATASE 12 gene family, and imprinting of a recently evolved MITE-minisatellite twin structure. Theoretical and Applied Genetics 117: 963–975. IF2017= 3.926. (一区TOP期刊)
44. Kun Lu, Jia-Na Li, Wei-Ran Zhong, Kai Zhang, Fu-You Fu, You-Rong Chai* (2008). Isolation, characterization and phosphate-starvation inducible expression of potential Brassica napus PURPLE ACID PHOSPHATASE 17 (BnPAP17) gene family. Botanical Studies, 49(3), 199–213.
英文专著
1. Yonghai Fan, Yue Niu, Xiaodong Li, Shengting Li, Cunmin Qu, Jiana Li, Kun Lu*. (2024) Population Genomics of Brassica Species. In: Om P. Rajora (ed.), Population Genomics: Crop Plants. Springer, Cham. https://doi.org/10.1007/13836_2021_98
2. Wei Chang, Yue Niu, Mengna Yu, Tian Li, Jiana L, Kun Lu*. qPrimerDB: A powerful and user-friendly database for qPCR Primer Design. In: Basu, Chhandak (Ed.) PCR Primer Design: Methods in Molecular Biology. Humana, New York, NY (2022) 2392: 173-182. https://doi.org/10.1007/978-1-0716-1799-1_13
3. Kun Lu, Rod Snowdon, Jiana Li*. Case Study for Trait-Related Gene Evolution: Glucosinolates. In: Liu S., Snowdon R., Chalhoub B. (eds) The Brassica napus Genome. Compendium of Plant Genomes. Springer, Cham. 2018 Oct 23; pp 199-222. https://doi.org/10.1007/978-3-319-43694-4_12.
发明专利、著作权与地方标准
发明专利
1. 卢坤，魏丝雨，廖中梦婷，魏丽娟，曲存民，李加纳. 甘蓝型油菜Bna.Arf基因在提高植物生物量中的应用. ZL202211465499.4，2024年5月10日
2. 卢坤，朱红，刘淼，于梦娜，曲存民，李加纳. CIPK6蛋白激酶在调控植物角果长度中的应用. ZL202211062538.1，2024年1月4日
3. 卢坤，刘淼，曲存民，张凯，梁颖，李加纳. 甘蓝型油菜Bna.A05DAD1基因的应用及方法. ZL202010423266.2，2022年7月1日
4. 卢坤，李加纳，刘淼，张凯，曲存民，王瑞. 基于BnaCnng52950D基因的启动子序列、重组载体及应用. ZL201910018567.4，2022年5月3日
5. 卢坤，刘绪梅，段回春，曲存民，李加纳. 甘蓝型油菜Bna.A08IDD7基因启动子及其应用. ZL202010956413.2，2021年9月11日
6. 卢坤，李加纳，张凯，曲存民，梁颖，唐章林. 甘蓝型油菜SKIP基因家族及其重组载体和应用，ZL201510319766.0，2017年10月24日
7. 张立源，卢坤，曲存民，万媛媛，张超，李加纳. 下调表达Bna-miR168a在改良油菜性状中应用，ZL202110740939.1，2022年5月20日
8. 曲存民，李加纳，卢坤，魏丽娟，徐新福，唐章林，王瑞，梁颖，刘列钊. MYB61基因在甘蓝型油菜粒色育种中的应用，ZL201811427911.7，2022年10月4日
9. 尹能文，曲存民，李加纳，卢坤，申树林，向思柔，唐云山，陈思，胡冉，万媛媛，一种筛选代谢组中差异代谢物的方法，ZL2021110618175.9，2022年8月5日
10. 曲存民，李加纳，卢坤，徐新福，王瑞，唐章林，梁颖，刘列钊，一种调控甘蓝型油菜粒色的转基因表达载体及其构建方法和应用，ZL201811308606.6，2023年4月11日
11. 柴友荣，李加纳，梁颖，张凯，卢坤，曲存民，王瑞，王敬乔，陈薇，白菜TT10基因家族及其应用，ZL201110459755.4，2013年11月20日
12. 柴友荣，李加纳，梁颖，张凯，卢坤，曲存民，王瑞，王敬乔，陈薇. 甘蓝型油菜TT10基因家族及其应用，ZL201010281910.3，2012年7月25日
13. 梁颖，李加纳，林呐，卢坤，谌利，油菜耐湿调控剂及其应用，ZL201310110596.6，2013年4月1日
14. 梁颖，李加纳，万华方，卢坤，徐新富，油菜耐湿种子包衣剂及其应用，ZL201310110557.6，2013年6月12日
15. 雷波，丁福章，卢坤，赵会纳，任竹，蔡凯，潘文杰，反向调节烟草NtPSY基因功能的载体组合物，ZL201310528496.5，2014年2月5日
16. 曲存民，李加纳，卢坤，付福友，王瑞，徐新福，张凯，与甘蓝型油菜种皮色泽紧密连锁的分子标记及应用，ZL201510079032.X，2015年6月24日
软件著作权
1. 卢坤，黎小东. 液相SNP芯片设计软件[简称：iArray] V1.0. 2021SR1379136，2021年7月31日
地方标准
1. 曲存民、李加纳、唐章林、徐新福、周清元、卢坤、刘列钊、王瑞、樊晋华、李祥洪. 重庆市地方标准：高油酸油菜籽生产技术规程，DB50/T 1026—2020，2020年09月04日
主持和参与培育油菜新品种
1. 渝黄11号，农业农村部GPD油菜(2024)500163，2024年4月21日（1/5）
2. 康油4号，农业农村部GPD油菜(2024)5000162，2024年4月21日（2/7）
3. 渝黄21号，农业农村部GPD油菜(2024)500086，2024年4月21日（3/8）
4. W01YA_R，渝品审鉴202327，2023年6月21日（4/6）
5. 渝油343，农业农村部GPD油菜(2022)500421，2022年12月30日（5/7）
6. 渝油55，农业农村部GPD油菜(2021)500039，2021年5月21日（4/8）
7. 渝油50，农业农村部GPD油菜(2020)500213，2020年10月31日（7/8）
8. 渝油48，农业农村部GPD油菜(2020)500226，2019年11月12日
9. 渝油60，农业农村部GPD 油菜(2019)500142，2019年10月31日
10. 渝油21，农业农村部GPD 油菜(2019)500056，2019年5月31日
11. 渝油25，农业农村部GPD 油菜(2018)500410，2018年12月26日
12. 渝油26，农业农村部GPD 油菜(2018)500411，2018年12月26日
13. 渝油27，农业农村部GPD 油菜(2018)500412，2018年12月26日
14. 渝油29，农业农村部GPD 油菜(2018)500296，2018年8月30日
15. 渝黄4号，农业农村部GPD 油菜(2018)500297，2018年8月30日
16. 渝油28，农业农村部GPD 油菜(2017)500198，2017年11月28日
国际学术会议报告
1. Kun Lu. Cloning and comparative analysis of phosphate-starvation Brassica PAP12 and PAP17 gene families, Korea-China Joint Workshop on Brassica Genomics, Dec 8, 2009, Suwon, Republic of Korea
2. Kun Lu. Expression quantitative trait loci analysis of BAN, F3H and TT19 genes in Brassica napus, 17th Crucifer Genetics Workshop, Sept 5-8, 2010, Saskatoon, Canada
3. Kun Lu. Expression quantitative trait loci analysis of BAN, F3H and TT19 genes in Brassica napus, 13th International Rapeseed Congress, June 5–9, 2011, Prague, Czech Republic
4. Kun Lu. Differential accumulation of phenolic compounds and expression of related genes between the black- and yellow-seeded Brassica napus, Initialization Meeting of Crop Germplasm Resources Utilization and Innovation Base (CGRUIB) Programme, July 17-19, 2012, Chongqing, China
5. Kun Lu. Genome-wide association analysis of Sclerotinia sclerotiorum and lodging resistance in Brassica napus, 14th International Rapeseed Congress, July 5-9, 2015, Saskatoon, Canada
6. Kun Lu. Whole-genome resequencing reveals Brassica napus origin and genetic loci involved in its domestication and improvement, International Workshop on Brassica Genomics, March 27-28, 2018, Wuhan, China
7. Kun Lu. Whole genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement, Canadian Lipid and Bioresource Conference 2018, September 9-11, 2018, Saskatoon, Canada
8. Kun Lu. Whole genome resequencing reveals Brassica napus origin and genetic loci involved in its improvement, 15th International Rapeseed Congress, June 16-19, 2019, Berlin, Germany
9. Kun Lu. BnaPan50T: An in-solution targeted capture SNP array for genomic breeding of Brassica napus, The SWU 111 Project Symposium 2021 on Crop Germplasm Resources Utilization and Innovation—Theories and Methodologies, December 8, 2021, Chongqing, China
10. Kun Lu. Comparative genomics and single-cell transcriptomics unravel the unique development patterns in two Brassica napus cultivars, 2022 International Symposium on Rapeseed Genomic Breeding, June 23, 2022, Wuhan, China
11. Kun Lu. Current status and prospects of the rapeseed industry in China, International Conference on Sustainable Food Security Solutions, May 29-31, 2023, Faisalabad, Pakistan
12. Mengna Yu, Kun Lu*. LESION MIMIC MUTANT 1 confers basal resistance to Sclerotinia sclerotiorum in rapeseed via a salicylic acid-dependent pathway, 16th International Rapeseed Congress, September 23-27, 2023, Sydney, Australia
13. Shengting Li, Kun Lu*. Functional divergence of BnaSnRK1.1 family members in regulating the growth and yield formation in Brassica napus, 16th International Rapeseed Congress, September 23-27, 2023, Sydney, Australia
14. Kun Lu. Comparative phylotranscriptome analysis reveals genes controlling seed size in Brassica crops, International Plant and Animal Genome Conference (PAG) ASIA 2024, June 4-7, 2024, Shenzhen, China
15. Kun Lu. Comparative phylotranscriptome analysis reveals genes controlling seed size in Brassica crops, 2024 International Symposium on Rapeseed Genomic Breeding, Nov 18-21, 2024, Wuhan, China